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SRX11346956: PROseq of human: RPE1 cells
1 ILLUMINA (NextSeq 550) run: 66.5M spots, 5.1G bases, 1.9Gb downloads

Design: PRO-seq with 4-biotin NTPs
Submitted by: University of Connecticut
Study: T2T - CHM13
show Abstracthide Abstract
We have sequenced the CHM13hTERT human cell line on the Oxford Nanopore GridION. We have also sequenced approximately 50x coverage using 10X Genomics as well as BioNano DLS and Arima Genomics HiC. PacBio data for this cell line has been previously generated by the Washington University School of Medicine and the University of Washington, and is available from NCBI SRA.Human genomic DNA was extracted from the cultured cell line. As the DNA is native, modified bases will be preserved. We followed Josh Quick's ultra-long read (UL) protocol for library preparation and sequencing.
Sample: Human sample from CHM13htert cell line from Homo sapiens
SAMN03255769 • SRS798661 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: RPE1-A_PROseq
Instrument: NextSeq 550
Strategy: OTHER
Source: TRANSCRIPTOMIC
Selection: other
Layout: SINGLE
Runs: 1 run, 66.5M spots, 5.1G bases, 1.9Gb
Run# of Spots# of BasesSizePublished
SRR1503550166,473,2065.1G1.9Gb2021-07-26

ID:
15155390

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